Protein ZmOFP30 | |
---|---|
Information | |
TF Name: | ZmOFP30 |
Species: | Maize |
TF Family: | OVATE |
Gene Name(Synonym): | OFP30 |
Uniprot ID: | B6SLZ3 |
Subgenome: | 1 |
ZmOFP30 is a protein in the OVATE family.
Overview of domains present in v5 transcripts | |
---|---|
PF04844 | |
Zm00001eb310670_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d020198 | DAPseq | sequence | fimo | position | |
Zm00001d020198 | DAPseq | sequence | fimo | position | |
Zm00001d020198 | ChIPseq | sequence | fimo | position | |
Zm00001d020198 | PChIPseq | sequence | fimo | position |
MHINVKRLLSSPLSTRALAPPHHKHTSGSTDRTESNNSDMEEAEAEEENKSTKAAGMGCKKNVTRLQRSFLHLSRALGKL
HGRRGHGNANGEASLSSSSSAATSSFLSGCMHPRTHSFALGRRHRHKRDGGGSGSGDALAVNFRSLQVDDEGGSSSAQHC
YHGDRGSEADEPKAVVRGAGVAVATLSAAPYEDFRRSMREMVEAAAGTGSGGAAAAAVDWDFMEELLFCYLRLNDRAVHK
DILRAFTDTVAAIRRRRRAAKSSRTRRRRRRQPRPGGDGPGRGDDCDGAEAVTSS
MHINVKRLLSSPLSTRALAPPHHKHTSGSTDRTESNNSDMEEAEAEEENKSTKAAGMGCKKNVTRLQRSFLHLSRALGKL
HGRRGHGNANGEASLSSSSSAATSSFLSGCMHPRTHSFALGRRHRHKRDGGGSGSGDALAVNFRSLQVDDEGGSSSAQHC
YHGDRGSEADEPKAVVRGAGVAVATLSAAPYEDFRRSMREMVEAAAGTGSGGAAAAAVDWDFMEELLFCYLRLNDRAVHK
DILRAFTDTVAAIRRRRRAAKSSRTRRRRRRQPRPGGDGPGRGDDCDGAEAVTSS
MHINVKRLLSSPLSTRALAPPHHKHTSGSTDRTESNNSDMEEAEAEEENKSTKAAGMGCKKNVTRLQRSFLHLSRALGKL
HGRRGHGNANGEASLSSSSSAATSSFLSGCMHPRTHSFALGRRHRHKRDGGGSGSGDALAVNFRSLQVDDEGGSSSAQHC
YHGDRGSEADEPKAVVRGAGVAVATLSAAPYEDFRRSMREMVEAAAGTGSGGAAAAAVDWDFMEELLFCYLRLNDRAVHK
DILRAFTDTVAAIRRRRRAAKSSRTRRRRRRQPRPGGDGPGRGDDCDGAEAVTSS
MHINVKRLLSSPLSTRALAPPHHKHTSGSTDRTESNNSDMEEAEAEEENKSTKAAGMGCKKNVTRLQRSFLHLSRALGKL
HGRRGHGNANGEASLSSSSSAATSSFLSGCMHPRTHSFALGRRHRHKRDGGGSGSGDALAVNFRSLQVDDEGGSSSAQHC
YHGDRGSEADEPKAVVRGAGVAVATLSAAPYEDFRRSMREMVEAAAGTGSGGAAAAAVDWDFMEELLFCYLRLNDRAVHK
DILRAFTDTVAAIRRRRRAAKSSRTRRRRRRQPRPGGDGPGRGDDCDGAEAVTSS
MHINVKRLLSSPLSTRALAPPHHKHTSGSTDRTESNNSDMEEAEAEEENKSTKAAGMGCKKNVTRLQRSFLHLSRALGKL
HGRRGHGNANGEASLSSSSSAATSSFLSGCMHPRTHSFALGRRHRHKRDGGGSGSGDALAVNFRSLQVDDEGGSSSAQHC
YHGDRGSEADEPKAVVRGAGVAVATLSAAPYEDFRRSMREMVEAAAGTGSGGAAAAAVDWDFMEELLFCYLRLNDRAVHK
DILRAFTDTVAAIRRRRRAAKSSRTRRRRRRQPRPGGDGPGRGDDCDGAEAVTSS
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF04844 |
|
Hover here to show all domains |
ATCTAGTTGTAACTCTCCCATGCAC...
ATCTAGTTGTAACTCTCCCATGCACATAAATGTGAAGCGCCTGCTCTCCTCTCCTCTCTCTACTAGAGCTTTAGCGCCTCCACACCACAAACACACATCAGGATCCACAGATCGAACAGAGTCCAACAACTCAGACATGGAGGAAGCGGAGGCGGAGGAGGAGAACAAGAGTACCAAGGCTGCGGGAATGGGATGCAAGAAGAATGTGACGAGGCTCCAGAGGTCATTCCTCCACCTGTCCAGAGCGCTCGGGAAGCTCCACGGCCGCCGGGGCCACGGGAACGCGAACGGCGAGGCGTCGCTGTCCTCGTCGTCCTCCGCTGCCACTTCGTCGTTCCTCTCCGGGTGCATGCATCCCCGGACGCACTCCTTCGCCTTGGGCCGCCGCCACCGCCACAAGCGCGACGGCGGCGGGTCGGGGTCGGGGGACGCTCTCGCCGTCAACTTCAGGTCGCTCCAGGTCGACGACGAGGGCGGCTCGTCGTCAGCGCAGCACTGTTATCACGGCGACCGCGGGAGCGAGGCGGACGAGCCCAAGGCGGTGGTCCGTGGCGCCGGCGTCGCGGTGGCCACGCTCTCCGCGGCGCCGTACGAAGACTTCCGGCGGTCCATGCGGGAGATGGTGGAAGCCGCCGCGGGGACGGGGAGCGGCGGCGCCGCCGCGGCGGCCGTGGACTGGGACTTCATGGAGGAGCTTCTGTTCTGCTACCTCCGCCTCAACGACCGCGCCGTGCACAAGGACATCCTCCGCGCGTTCACCGACACGGTCGCCGCGATCCGGCGCCGGCGCAGGGCGGCGAAGAGCAGCCGCACGCGTCGTAGGCGGCGCAGGCAGCCGAGGCCCGGAGGAGACGGCCCCGGCCGTGGCGACGACTGTGACGGCGCGGAGGCGGTGACCTCGTCGTGACTGGTGCCAAATGTGTACGTGTGCATACACCGGCGAAGCGCCAGCGGCCGCGCGCCTCGCTGTCCGGCCGGTCAGTCGGTGATAGCACGAGTTAATGTTTTGTTCATACGCTTTACGGCTTTAGCTAAAGTAACGTAACGTGCATTGCTGTGTCAATGTTTCTTCCTCCGCCAGCCACCTCAGTTCATTTTCGTCACCCATTTGTGGCT
MEEAEAEEENKSTKAAGMGCKKNVTRLQRSFLHLSRALGKLHGRRGHGNANGEASLSSSSSAATSSFLSGCMHPRTHSFA
LGRRHRHKRDGGGSGSGDALAVNFRSLQVDDEGGSSSAQHCYHGDRGSEADEPKAVVRGAGVAVATLSAAPYEDFRRSMR
EMVEAAAGTGSGGAAAAAVDWDFMEELLFCYLRLNDRAVHKDILRAFTDTVAAIRRRRRAAKSSRTRRRRRRQPRPGGDG
PGRGDDCDGAEAVTSS
ACTAGAGCTTTAGCGCCTCCACACC...
ACTAGAGCTTTAGCGCCTCCACACCACAAACACACATCAGGATCCACAGATCGAACAGAGTCCAACAACTCAGACATGGAGGAAGCGGAGGCGGAGGAGGAGAACAAGAGTACCAAGGCTGCGGGAATGGGATGCAAGAAGAATGTGACGAGGCTCCAGAGGTCATTCCTCCACCTGTCCAGAGCGCTCGGGAAGCTCCACGGCCGCCGGGGCCACGGGAACGCGAACGGCGAGGCGTCGCTGTCCTCGTCGTCCTCCGCTGCCACTTCGTCGTTCCTCTCCGGGTGCATGCATCCCCGGACGCACTCCTTCGCCTTGGGCCGCCGCCACCGCCACAAGCGCGACGGCGGCGGGTCGGGGTCGGGGGACGCTCTCGCCGTCAACTTCAGGTCGCTCCAGGTCGACGACGAGGGCGGCTCGTCGTCAGCGCAGCACTGTTATCACGGCGACCGCGGGAGCGAGGCGGACGAGCCCAAGGCGGTGGTCCGTGGCGCCGGCGTCGCGGTGGCCACGCTCTCCGCGGCGCCGTACGAAGACTTCCGGCGGTCCATGCGGGAGATGGTGGAAGCCGCCGCGGGGACGGGGAGCGGCGGCGCCGCCGCGGCGGCCGTGGACTGGGACTTCATGGAGGAGCTTCTGTTCTGCTACCTCCGCCTCAACGACCGCGCCGTGCACAAGGACATCCTCCGCGCGTTCACCGACACGGTCGCCGCGATCCGGCGCCGGCGCAGGGCGGCGAAGAGCAGCCGCACGCGTCGTAGGCGGCGCAGGCAGCCGAGGCCCGGAGGAGACGGCCCCGGCCGTGGCGACGACTGTGACGGCGCGGAGGCGGTGACCTCGTCGTGACTGGTGCCAAATGTGTACGTGTGCATACACCGGCGAAGCGCCAGCGGCCGCGCGCCTCGCTGTCCGGCCGGTCAGTCGGTGATAGCACGAGTTAATGTTTTGTTCATACGCTTTACGGCTTTAGCTAAAGTAACGTAACGTGCATTGCTGTGTCAATGTTTCTTCCTCCGCCAGCCACCTCAGTTCATTTTCGTCACCCATTTGTGGCTACTTCGATCGATTTGTTGGTAACTTCTCTGCATTTTCATAGCTAAAAGCTAAAGTTGCCCAAATCCCGTGACAGCAATCTGTGCCCAATACAAAAAAAAA
MEEAEAEEENKSTKAAGMGCKKNVTRLQRSFLHLSRALGKLHGRRGHGNANGEASLSSSSSAATSSFLSGCMHPRTHSFA
LGRRHRHKRDGGGSGSGDALAVNFRSLQVDDEGGSSSAQHCYHGDRGSEADEPKAVVRGAGVAVATLSAAPYEDFRRSMR
EMVEAAAGTGSGGAAAAAVDWDFMEELLFCYLRLNDRAVHKDILRAFTDTVAAIRRRRRAAKSSRTRRRRRRQPRPGGDG
PGRGDDCDGAEAVTSS
ATGGAGGAAGCGGAGGCGGAGGAGG...
ATGGAGGAAGCGGAGGCGGAGGAGGAGAACAAGAGTACCAAGGCTGCGGGAATGGGATGCAAGAAGAATGTGACGAGGCTCCAGAGGTCATTCCTCCACCTGTCCAGAGCGCTCGGGAAGCTCCACGGCCGCCGGGGCCACGGGAACGCGAACGGCGAGGCGTCGCTGTCCTCGTCGTCCTCCGCTGCCACTTCGTCGTTCCTCTCCGGGTGCATGCATCCCCGGACGCACTCCTTCGCCTTGGGCCGCCGCCACCGCCACAAGCGCGACGGCGGCGGGTCGGGGTCGGGGGACGCTCTCGCCGTCAACTTCAGGTCGCTCCAGGTCGACGACGAGGGCGGCTCGTCGTCAGCGCAGCACTGTTATCACGGCGACCGCGGGAGCGAGGCGGACGAGCCCAAGGCGGTGGTCCGTGGCGCCGGCGTCGCGGTGGCCACGCTCTCCGCGGCGCCGTACGAAGACTTCCGGCGGTCCATGCGGGAGATGGTGGAAGCCGCCGCGGGGACGGGGAGCGGCGGCGCCGCCGCGGCGGCCGTGGACTGGGACTTCATGGAGGAGCTTCTGTTCTGCTACCTCCGCCTCAACGACCGCGCCGTGCACAAGGACATCCTCCGCGCGTTCACCGACACGGTCGCCGCGATCCGGCGCCGGCGCAGGGCGGCGAAGAGCAGCCGCACGCGTCGTAGGCGGCGCAGGCAGCCGAGGCCCGGAGGAGACGGCCCCGGCCGTGGCGACGACTGTGACGGCGCGGAGGCGGTGACCTCGTCGTGA
Copyright © 2023 Grassius.org | Last updated: 2023-06-26